PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021297644.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ZF-HD
Protein Properties Length: 131aa    MW: 14030.4 Da    PI: 6.7395
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021297644.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer104.95.2e-3362118360
     ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60 
                     +vrY eC+kNhAa +Gg+avDGC+Efm+s geegt+aal+CaACgCHRnFHRreve+e
  XP_021297644.1  62 SVRYGECQKNHAAGVGGYAVDGCREFMAS-GEEGTSAALTCAACGCHRNFHRREVETE 118
                     69**************************9.999*********************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 131 aa     Download sequence    
MPVSDSQALS KSDNSSSVLQ GSGVEGGDKE EFGDRRMRKR QVVVRREEPP RSTTNSSLTI  60
RSVRYGECQK NHAAGVGGYA VDGCREFMAS GEEGTSAALT CAACGCHRNF HRREVETEVV  120
CECSSPPSNG A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28917.16e-36ZF-HD family protein