PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021297636.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family bHLH
Protein Properties Length: 91aa    MW: 10357.8 Da    PI: 8.5214
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021297636.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH247e-0822581854
                    HHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH 18 safeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                    +  ++Lr+llP+ +   +s K+s + +L+++++YI+sL
  XP_021297636.1 22 ELVSKLRQLLPEiR-DRRSDKVSASKVLQETCNYIRSL 58
                    56689*******76.99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 91 aa     Download sequence    
MSSRRSRQSA SVSRISDDQI IELVSKLRQL LPEIRDRRSD KVSASKVLQE TCNYIRSLHR  60
EVDDLSERLS QLLATIDSDS AEAAIIRSLI M
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28857.12e-37bHLH family protein