PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021297495.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family bHLH
Protein Properties Length: 316aa    MW: 36418.4 Da    PI: 5.0328
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021297495.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.53.3e-051136126
                    CHHHHHHHHHHHHHHHHHHHHHHHCT CS
             HLH  1 rrrahnerErrRRdriNsafeeLrel 26
                    +r a+ner+rrRR++ N  fe+L+ +
  XP_021297495.1 11 QRSAKNERDRRRRRERNLEFERLQNV 36
                    799********************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MVQSRSLSPA QRSAKNERDR RRRRERNLEF ERLQNVAAKY QEMAPLLGAL RVEVTTVRNI  60
ISQLAEDSRR LNDVEPDLTR KIHQLDNIVR QNMQEMVLPT IGKEANNEPI DLGVESSRSD  120
IQYTDEVLQD FIEKLDDKEK SRVDFLDFKG LPEELEKCGR FSLPPSLAPI HEILFKAYGD  180
ITAESNQSSP VIRDSYILFC SVIKEMNEVQ LEQVDLDKMI LWRDAINSGL SIGFKGNFAI  240
EHLKKIARAY FGAKARNDQE LKSLEERMSE LKAELYALEK MHDSIIESKS SEMCRECLRD  300
EEYFQGKPLS AGLFLS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11925DRRRRRE