PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021297493.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family bHLH
Protein Properties Length: 331aa    MW: 38372.6 Da    PI: 5.15
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021297493.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.43.5e-051136126
                    CHHHHHHHHHHHHHHHHHHHHHHHCT CS
             HLH  1 rrrahnerErrRRdriNsafeeLrel 26
                    +r a+ner+rrRR++ N  fe+L+ +
  XP_021297493.1 11 QRSAKNERDRRRRRERNLEFERLQNV 36
                    799********************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MVQSRSLSPA QRSAKNERDR RRRRERNLEF ERLQNVAAKY QEMAPLLGAL RVEVTTVRNI  60
ISQLAEDSRR LNDVEPDLTR KIHQLDNIVR QNQTEQVERR QRLSQWQMQE MVLPTIGKEA  120
NNEPIDLGVE SSRSDIQYTD EVLQDFIEKL DDKEKSRVDF LDFKGLPEEL EKCGRFSLPP  180
SLAPIHEILF KAYGDITAES NQSSPVIRDS YILFCSVIKE MNEVQLEQVD LDKMILWRDA  240
INSGLSIGFK GNFAIEHLKK IARAYFGAKA RNDQELKSLE ERMSELKAEL YALEKMHDSI  300
IESKSSEMCR ECLRDEEYFQ GKPLSAGLFL S
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11925DRRRRRE