PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021297456.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | bHLH | ||||||||
Protein Properties | Length: 233aa MW: 26802.3 Da PI: 6.2563 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 44.1 | 3.7e-14 | 63 | 115 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r+ +hn+rEr RR++iNs + Lr+llP + ++ k+ls ++ ++ +YI +Lq XP_021297456.1 63 RKLNHNARERDRRKKINSLYTSLRSLLPLS--EQTKRLSIPATISRVLKYIPELQ 115 6889*************************7..36666***************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
MCALTPFPVC EWPLDAPINH IEQISYAEGF EDFHHFTSTL PPIELDGSPS FSGDSGNNPI 60 VLRKLNHNAR ERDRRKKINS LYTSLRSLLP LSEQTKRLSI PATISRVLKY IPELQAHVER 120 LAQRKEEILS RQDEFSCDQD NKREGSSPFA MSVSRVSERE VVVQISTFRA FETPLSRVLF 180 NLEEDGLFLT EASCFESFGG RVFYNLHFQV ERTYNLEGVV LNEKLSSLYE KRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56970.1 | 9e-47 | bHLH family protein |