PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021297438.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

bZIP

Protein Properties

Length: 688aa MW: 74858.9 Da PI: 6.9327

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021297438.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	37.3	5.9e-12	185	247	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+e kr r+++NRe+A+ sRqRKk ++eeLe+kv ++ + +L +++ e a+l++++ XP_021297438.1 185 EEEEKRRARLMRNRESAQLSRQRKKHYVEELEDKVRAMHSTIADLNNKIAYFMAENATLRQQL 247 6889********************************************999999999999875 PP

Sequence ? help Back to Top
Protein Sequence Length: 688 aa Download sequence
MAEAPAEPVM GSELESLAIP PMDPLFLSTD LGFSLDDNDD FQITFDDFDQ FCFPSDSEHL 60 LMPDSSTTPD SDVERYLNSS SPELGSCNGP DSSGNSDSPL SSLGSGNCAS AVSEAMNAAS 120 PDSENIVDQK ISVEEMGKRR VSKRKKDHEE TDSSKSRRSS LTTSVNNSNS NSDNNNNNNS 180 NAPSEEEEKR RARLMRNRES AQLSRQRKKH YVEELEDKVR AMHSTIADLN NKIAYFMAEN 240 ATLRQQLSTA ATGGGGGGGA GMCPPQPLPM PMYPPMAYPW VPCVPPYVMK PPGSQVPLVP 300 IPRLKPQQPS VPASKARKNE SKTKKVASVS LLGMLFFILL FGGLAPILNV KYDNTSVGSG 360 FVGDGFYEVH RGRVLRVDGH LNGSNNSRDV AFSYEKFDHR NRVHGRGSES GVEQKERGAH 420 SVPGYMNNGS EPLTASLYVP RNDKLVKIDG NLIIHSVLAS EKAMASHKAS QIKNKETGLA 480 IPNNFSPALA IPDARENGGK RSREYRNPAE RQMALSSGNA DALKDHFRST VADGKMQQWF 540 REGLAGPMLS SGMCTEVFQF DVSAAIVPAS SVTNVSAEHH QNGTQHNKGR NRRILHGHPV 600 PLSRSDVNIT EQHVGRNSPK ENFKGNKTAS SMVVSVLIDP REAGDGDIDD MIVPKSLSRI 660 FVVVLVDSVK YVTYSCMLPL SGLHLMTA

Sequence ? help Back to Top

Protein Sequence Length: 688 aa Download sequence

MAEAPAEPVM GSELESLAIP PMDPLFLSTD LGFSLDDNDD FQITFDDFDQ FCFPSDSEHL  60
LMPDSSTTPD SDVERYLNSS SPELGSCNGP DSSGNSDSPL SSLGSGNCAS AVSEAMNAAS  120
PDSENIVDQK ISVEEMGKRR VSKRKKDHEE TDSSKSRRSS LTTSVNNSNS NSDNNNNNNS  180
NAPSEEEEKR RARLMRNRES AQLSRQRKKH YVEELEDKVR AMHSTIADLN NKIAYFMAEN  240
ATLRQQLSTA ATGGGGGGGA GMCPPQPLPM PMYPPMAYPW VPCVPPYVMK PPGSQVPLVP  300
IPRLKPQQPS VPASKARKNE SKTKKVASVS LLGMLFFILL FGGLAPILNV KYDNTSVGSG  360
FVGDGFYEVH RGRVLRVDGH LNGSNNSRDV AFSYEKFDHR NRVHGRGSES GVEQKERGAH  420
SVPGYMNNGS EPLTASLYVP RNDKLVKIDG NLIIHSVLAS EKAMASHKAS QIKNKETGLA  480
IPNNFSPALA IPDARENGGK RSREYRNPAE RQMALSSGNA DALKDHFRST VADGKMQQWF  540
REGLAGPMLS SGMCTEVFQF DVSAAIVPAS SVTNVSAEHH QNGTQHNKGR NRRILHGHPV  600
PLSRSDVNIT EQHVGRNSPK ENFKGNKTAS SMVVSVLIDP REAGDGDIDD MIVPKSLSRI  660
FVVVLVDSVK YVTYSCMLPL SGLHLMTA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	139	145	RRVSKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40950.1	1e-168	bZIP family protein