PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021297352.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

bZIP

Protein Properties

Length: 464aa MW: 51145.2 Da PI: 8.4482

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021297352.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	30.3	9.2e-10	178	219	4	45
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 k rr+++NReAAr+sR+RKka++++Le +L++ ++L XP_021297352.1 178 QKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 219 6889*************************9777777666555 PP

Sequence ? help Back to Top
Protein Sequence Length: 464 aa Download sequence
MGSRTVNIGI ENDKKAVTAM PSYVPSVPTS NPSTEANTIR SSRIPDLGTL EQSLGFRIED 60 AVDLTRNPLF NQIKSSTQAI ADAQFGAINK TLASADNNLS AAIVGSQTLT LKKDTPPNLV 120 SISAGRENWG DSNMADASPR TDISTDDTDE KNQTFERGQT NAIVASDSSD RSKDKTDQKT 180 LRRLAQNREA ARKSRLRKKA YVQQLESSRL KLTQLEQELQ RARQQGIFIS SSGDQSHSMS 240 GNGALAFDVE YARWLEEHNR QINELRAAVN SHAGDTELRT IVDNVTAHFD DIFRLKGIAA 300 KADVFHILSG MWKTPAERCF LWIGGFRSSE LLKLLANQLE PLTEQQFMGF HNLQQSSQQA 360 EDALSQGMEA LQQSLAETLA NGSPGPSGSS GNVANYMGQM AMAMGKLGTL EGFVRQADNL 420 RQQTLQQMHR ILTTRQSARA LLAINDYFSR LRALSSLWLA RPRE

Sequence ? help Back to Top

Protein Sequence Length: 464 aa Download sequence

MGSRTVNIGI ENDKKAVTAM PSYVPSVPTS NPSTEANTIR SSRIPDLGTL EQSLGFRIED  60
AVDLTRNPLF NQIKSSTQAI ADAQFGAINK TLASADNNLS AAIVGSQTLT LKKDTPPNLV  120
SISAGRENWG DSNMADASPR TDISTDDTDE KNQTFERGQT NAIVASDSSD RSKDKTDQKT  180
LRRLAQNREA ARKSRLRKKA YVQQLESSRL KLTQLEQELQ RARQQGIFIS SSGDQSHSMS  240
GNGALAFDVE YARWLEEHNR QINELRAAVN SHAGDTELRT IVDNVTAHFD DIFRLKGIAA  300
KADVFHILSG MWKTPAERCF LWIGGFRSSE LLKLLANQLE PLTEQQFMGF HNLQQSSQQA  360
EDALSQGMEA LQQSLAETLA NGSPGPSGSS GNVANYMGQM AMAMGKLGTL EGFVRQADNL  420
RQQTLQQMHR ILTTRQSARA LLAINDYFSR LRALSSLWLA RPRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G12250.1	1e-144	bZIP family protein