PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021297278.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family NAC
Protein Properties Length: 326aa    MW: 36887.4 Da    PI: 9.4921
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021297278.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM97.42.1e-30179253128
             NAM  53 aeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                      +ekew+f+++rd+ky++g+r+nr+t+sgyWkatg d+ + +++++ +glkktLvfy+g+apkg +t+W+m+eyrl
  XP_021297278.1  17 IGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRAENSRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRL 92 
                     4789**********************************************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MPTLYHVRFL SHALAAIGEK EWFFYVPRDR KYRNGDRPNR VTTSGYWKAT GADRMIRAEN  60
SRSIGLKKTL VFYSGKAPKG IRTSWIMNEY RLPQHETERY QKAEISLCRV YKRAGVEDHP  120
SLPRCLPTRP SASLRGQQSG KKYPHDAAQQ AMGRFHGFGG QSQQMEIEKI SETDGSSSST  180
SDVTTALGLS KQNVYRPMAP ISTTLGLPSG IEEEGMFLNQ SKQGCSSLVP NCTTVFTVGS  240
SVSPNVVDDL HRLVSYQHAT MNQQQHYYSD HHHQQQQQSE LSTLPSQSQQ LSLNMLPSSL  300
PTAFSDRLWE WNPIPEANRE YNNPFK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02450.18e-74NAC family protein