PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021297006.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family bZIP
Protein Properties Length: 360aa    MW: 39024.4 Da    PI: 6.1164
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021297006.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.71.6e-10159207553
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 
                     kr++r + NR +A rs +RK  +i eLe+kv++L++e ++L  +l   +
  XP_021297006.1 159 KRAKRIIANRQSAARSKERKARYISELERKVQTLQTEATTLSAQLTLFQ 207
                     9****************************************99887655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    
MPDPSSLSPN PDPPIHSNAS STFPNPTTFR GSNHRRAQSE VQFRIPDDLD LVSDPFEGLG  60
SEDDLFCSYM DIEKLGGSSK VADEGGAAAG SSSAGSGQNP KGGEEMSGGS GMGEKSTGGG  120
KGRHRYSNSV DGCSMMESIE AKKAMAPDKL AELWTVDPKR AKRIIANRQS AARSKERKAR  180
YISELERKVQ TLQTEATTLS AQLTLFQRDT TGLSTENTEL KLRLQAMEQQ AQLRDALNEA  240
LKKEVERLKI ATGEMTTPTD TFNLGMHHIP YTQSSYFPLQ PQHVQVDTQN IQMPQFHPFQ  300
SNMLTPNQSV VAASNSHAFA DMMQQDPLGR LQGLDISSRG SRFVKSEGPS ISAGESGGTL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40620.11e-119bZIP family protein