PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021296813.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | ARR-B | ||||||||
Protein Properties | Length: 433aa MW: 48184.4 Da PI: 6.2949 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 67.7 | 2e-21 | 197 | 251 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++WtpeL ++Fv+av+ L Pk+ile+mk +gLt+++v+SHLQkYR+ XP_021296813.1 197 KKRMVWTPELDAKFVRAVQTLSKGSMVHPKRILEIMKEPGLTRAKVASHLQKYRM 251 78*******************9889999**************************8 PP | |||||||
2 | Myb_DNA-binding | 37.6 | 5e-12 | 199 | 250 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+ WT+e+d ++v+av+ l +g ++k+I + m g+t+ + s++qky+ XP_021296813.1 199 RMVWTPELDAKFVRAVQTLSKGsmvHPKRILEIMKePGLTRAKVASHLQKYR 250 789************************************************7 PP | |||||||
3 | Response_reg | 59.7 | 1.6e-20 | 29 | 138 | 2 | 111 |
EEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTE CS Response_reg 2 livdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGa 94 l vd + + ++ l ++l k +y +v++++++ eale+l +++ +D++l+D++ +++G++ll+ i e +p+i+vt+ g+ e +++ l++Ga XP_021296813.1 29 LAVDAQIFSLQYLSVVLHKCNY-KVKATTSAAEALEILGANKneFDVVLVDVDSANIKGFKLLEIIGLEM-YIPVIMVTGDGSLENIIKGLNYGA 121 567778888999**********.***************666667**********************5544.7*********************** PP SEEEESS--HHHHHHHH CS Response_reg 95 kdflsKpfdpeelvkav 111 d++ Kp+ +e+ +a+ XP_021296813.1 122 VDYIIKPVGVQEIKDAI 138 *************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 433 aa Download sequence |
MEENFLNKRP ENSAVEIDDD AAVHKLRLLA VDAQIFSLQY LSVVLHKCNY KVKATTSAAE 60 ALEILGANKN EFDVVLVDVD SANIKGFKLL EIIGLEMYIP VIMVTGDGSL ENIIKGLNYG 120 AVDYIIKPVG VQEIKDAIWH CVAPNNTDWG SQQSTDTHES SDHQNVKPSE HSDASFTVED 180 DKHNTPLDDA SSSCQRKKRM VWTPELDAKF VRAVQTLSKG SMVHPKRILE IMKEPGLTRA 240 KVASHLQKYR MSLKKQQSFD IESVTRFSST KRTNRRYGKA GDVNADPVAV PSFNPFNSLE 300 DIMLVDPEKP YQSVPYSCLD DLNFQTPDFK SFNYYNYCLG MNIQPHNLGS EPLPGITSRP 360 PYFHDVGSEA SSPSSAPFYP SSNAFLAPET DVPFQSSFAV ASVPNRFPVK RSWTTGQSTN 420 LGNLLLSAAR RLL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G25180.1 | 2e-46 | ARR-B family protein |