PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021296794.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | NAC | ||||||||
Protein Properties | Length: 172aa MW: 19971.8 Da PI: 8.6241 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 76.3 | 7.4e-24 | 11 | 143 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk.lel.eevikevdiykv.ePwdLpk.....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 +G+rF+P+d l+ yL k+++k+ l++ +evik++d+y ePw++ + ++ + +++yfF++++kk++++++ nr + +g+Wk tg XP_021296794.1 11 LVGLRFQPSDAMLL-GYLFSKITNKSrLHVdQEVIKDFDLYGEkEPWEIWElyrgdNL-RSGEDLYFFTRSKKKTQNSSKMNRLIGTGTWKITGP 103 68*********999.7888888888774441467******96449****742333222.245689****************************** PP NAM 89 dkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++ + + + g +k + + ++ a+ + ++W+m ey+l XP_021296794.1 104 PEAITYSqlSAQPLGFRKRFRYKSEVAQ--QVSQWIMFEYSL 143 ****998777888*********955554..58********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 172 aa Download sequence |
MGDNIPVAAL LVGLRFQPSD AMLLGYLFSK ITNKSRLHVD QEVIKDFDLY GEKEPWEIWE 60 LYRGDNLRSG EDLYFFTRSK KKTQNSSKMN RLIGTGTWKI TGPPEAITYS QLSAQPLGFR 120 KRFRYKSEVA QQVSQWIMFE YSLDTDHDLV SKNDCNYVLC GLQKRDLKEE KG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G12260.1 | 2e-18 | NAC family protein |