PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021296767.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family G2-like
Protein Properties Length: 330aa    MW: 37452.6 Da    PI: 8.2749
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021296767.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like94.86.9e-30224278256
         G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                     +r+ W+peLH+rFvea++ LGG+ +AtPk+i+e+m+v+gLt+++vkSHLQkYRl+
  XP_021296767.1 224 NRRSWSPELHARFVEALNLLGGIGVATPKQIKEVMQVEGLTNDQVKSHLQKYRLH 278
                     799**************************************************97 PP
2Myb_DNA-binding44.24.6e-14225276148
                      TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r +W++e++ ++v+a ++lGg    t+k I + m+ +g+t  q+ks++qky+
   XP_021296767.1 225 RRSWSPELHARFVEALNLLGGIgvaTPKQIKEVMQvEGLTNDQVKSHLQKYR 276
                      678*****************88*****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MASSSSLELN LSLKPSYVPK TIANLLKDLS HVDNASDKLA VLNDYINQHE EELNSIVAFK  60
RQLPQCMLLL MEALGTLKDE FMSIKNGMES ETGRPLMDFL AIKRKHCEEE QTDISVAKKY  120
DCKGKSLMKS SPQLWNSNCE NKEEKTFIDF IQAPNQNPIP FKESTFNLSL AEKGCISTEI  180
IRKSYSRFAS AGTNNGHSGL NLRADNRTLN YHPRPLTQPI WKNNRRSWSP ELHARFVEAL  240
NLLGGIGVAT PKQIKEVMQV EGLTNDQVKS HLQKYRLHCR RLPENYAKCL VKFPDPWHPQ  300
IYYGDPLSPE DSDENNSNPE GSLSKKSSRT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37180.16e-38G2-like family protein