PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021296602.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | FAR1 | ||||||||
Protein Properties | Length: 858aa MW: 96886.2 Da PI: 6.7915 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 48.9 | 2.2e-15 | 65 | 140 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY+ YA+++GFs+ + + k+ k +g i++ +f Cs+e +++++ ++ C+a++++++++ gkw+ tk++++HnH+++ XP_021296602.1 65 SFYDGYARRLGFSTHVGQFKRAKPDGPIVTWDFACSREVFKRKNIES--------------CNAMFRIEQRDGGKWVATKFVEDHNHSMV 140 5****************************************998877..............**************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 858 aa Download sequence |
MDVGGGKGDN VTGLNVLSNK GGDNNWDVTE QSPEIEVVVN QDDDGAGGGK PFVGMEFDSE 60 DAGKSFYDGY ARRLGFSTHV GQFKRAKPDG PIVTWDFACS REVFKRKNIE SCNAMFRIEQ 120 RDGGKWVATK FVEDHNHSMV TPSKVHYLRP RRHFAGATKN VPETLDATTD VFVSTDGNHI 180 SYEANRVRSA SSVEPNRLVR NMMPVGYVRP SSQRRMLGRD AQNLLNYFKK MQAENPGFYY 240 AIQLDDDNRM TNVFWADARS RTAYNYFGDA VIFDTMYRPN QYQIPFAPFT GINHHGQTVL 300 FGCALLLDES ESSFAWLFKT WLSAMNDRPP VSITTDQDRA IQAAVSQVFP ETRHCICRWH 360 ILREGQERLA HIYLVHPSFY GELYGCINFS EAIEDFESSW SALLDKYDLH KNEWLQAVYN 420 ARQQWAPVYF RGTFFATLSS NQGVSSFFDG YVNQQTTIPL FFKQYERALE HSLEKEIEAD 480 CDTICTTPVL KTPSPMEQQA ANLYTKKVFS KFQDELVETF VYTANKIEGD GIASKYRVAK 540 YEHDHKAYFV TLNVSEMKAS CSCQMFEYSG ILCRHILTVF TVTNVLTLPS HYILKRWTRN 600 AKSWVGLDDQ HADPQGIETL TTRFNSLCQE AFKLAEEGAV APETYNTAIS ALREAGKKVA 660 FVKKNVAKVT LPSSHNSGNS HEEGSKKTAS PVSEMVPSLW PWQDAVSPRF NLNDVGAPLA 720 DLNQPSMVPV SIHRDGGHPD STVVLTCFKS MTWVIENKNA MEAGKVAVIN LKLHDYGKNP 780 SGETEVQFRL TRITLEPMLR SMAYISQQLS TPVNRVAVIN LKLQDTKTTS GETEVKFQVS 840 RDTLGSMLRS MAYIREQL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G27110.2 | 0.0 | FAR1 family protein |