PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021296588.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 236aa MW: 27248.8 Da PI: 7.1665 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 95.4 | 2.5e-30 | 9 | 58 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 +rienk+nrqvtfskRrng+lKKA+ELSvLCdaeva+iifss+gkl e+ XP_021296588.1 9 ERIENKINRQVTFSKRRNGMLKKAYELSVLCDAEVALIIFSSRGKLSEFG 58 69**********************************************95 PP | |||||||
2 | K-box | 79 | 1.2e-26 | 81 | 169 | 11 | 99 |
K-box 11 eakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 + ++++l+qe+ +Lk++ e+Lq +qR+llGe+Le+Ls+keL ++e+q++++l++ R+kK +llle +eel+k+e el++enk+L+++le XP_021296588.1 81 ADETQTLYQEVLRLKAKHESLQLSQRRLLGEELEELSMKELYNIEKQVDRALTQARQKKVQLLLERMEELRKREVELEDENKQLKSQLE 169 56799********************************************************************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence |
MGRGKVVLER IENKINRQVT FSKRRNGMLK KAYELSVLCD AEVALIIFSS RGKLSEFGSS 60 TVSQTLEKYW QHRYTSDVHF ADETQTLYQE VLRLKAKHES LQLSQRRLLG EELEELSMKE 120 LYNIEKQVDR ALTQARQKKV QLLLERMEEL RKREVELEDE NKQLKSQLEL EQSFQAAQGL 180 GDPNIEAGYE DNIPPSQANH AHLPSLPQGY HQFIPQERAS EARLDKGANK PTAGWL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45650.1 | 2e-44 | MIKC_MADS family protein |