PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021296547.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family bHLH
Protein Properties Length: 272aa    MW: 30587.5 Da    PI: 7.0041
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021296547.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.41.3e-08165212455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++iN+++  L++l+P +    +k +  a +L + ++Y++sLq
  XP_021296547.1 165 SHSLAERVRREKINEKMRCLQDLVPGC----HKTMGMAVMLDEIINYVHSLQ 212
                     8*************************9....788999************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MGEFRLHLQG FRPSQPISEM DISVEMTKQS SELNSTLLEN FSIADFSLET LLAHQLPEYP  60
ASCTHDSLST TVLAGSFTAI PTARTVTVDE DVFIESKKRK AMEQSTSNYQ SISPALSTTE  120
IGGNNSTRKK NRLGRGKKGK SNEKQPEKAE EVIHVRARRG QATDSHSLAE RVRREKINEK  180
MRCLQDLVPG CHKTMGMAVM LDEIINYVHS LQNQVEFLSM ELAAASSAYD LNLETECFKK  240
AQGTNSHVAQ QMEKWARDRY GEQNCFHSTW PL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25330.12e-53bHLH family protein