PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021296448.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MYB | ||||||||
Protein Properties | Length: 555aa MW: 60232.2 Da PI: 4.7458 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.5 | 2.6e-17 | 39 | 86 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT Ed +l+++vk++G g+W+++ ++ g+ R++k+c++rw ++l XP_021296448.1 39 KGPWTSAEDAILIEYVKKHGEGNWNAVQKHSGLFRCGKSCRLRWANHL 86 79******************************************9986 PP | |||||||
2 | Myb_DNA-binding | 53.9 | 4.1e-17 | 92 | 135 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++T+eE++l++++++++G++ W++ a++++ gRt++++k++w++ XP_021296448.1 92 KGAFTQEEEQLIIELHAKMGNK-WARMAAHLP-GRTDNEIKNYWNT 135 799*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 555 aa Download sequence |
MSHTKNERED GMLSKDPAES PLADDGNCGG AGGGVVLKKG PWTSAEDAIL IEYVKKHGEG 60 NWNAVQKHSG LFRCGKSCRL RWANHLRPNL KKGAFTQEEE QLIIELHAKM GNKWARMAAH 120 LPGRTDNEIK NYWNTRIKRR QRAGLPLYPP EVCLQALQES HSTSALNGGD KGPHDIMQNN 180 SYEMPDVIFD SLKANQSVLP YVPELPDIST SSMLMKGLGS SQYCSFMPPT IHRQKRLRES 240 TAFFPGYTGT VKNECPLFDQ FQDDMSDKAA QSFGVSFPIE PDPTAKNSQS FGVFPGSHAL 300 TNGNFSASES SLEAAKLELP SLQYPETELG NWGTISCPPP LLESVDAFIQ SPPPTSGVES 360 DSLSPRNSGL LDALLHEAKT LSSAKNHASD KSSNSSTPGD IAESSNFNIC ETEWENCGEP 420 LSPMGHSATS LFSECISASG SSLDEQPPAE TLTESYVKSE TADHVLTLEI QKEAPIRLDS 480 TCPDTLLASN WLEQGCVYGK DQTIMSDAMA TLLGDDLSSE YKNMAAGTSI SSQAWGLGSC 540 AWNNMPAVCQ ISELP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06100.3 | 1e-135 | MYB family protein |