PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021296319.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | bHLH | ||||||||
Protein Properties | Length: 275aa MW: 31013.2 Da PI: 4.858 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 57.8 | 1.9e-18 | 41 | 90 | 2 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h+e E+rRR++iN++f++Lr+l+P++ ++K +Ka+ L +++eYI+ Lq XP_021296319.1 41 RSKHSETEQRRRSKINERFQTLRDLIPQN----DQKRDKASFLLEVIEYIQFLQ 90 899*************************9....9*******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 275 aa Download sequence |
MVKPVATAQL HQEEEDEDDY EDKGETVKEG KGSEQKANTN RSKHSETEQR RRSKINERFQ 60 TLRDLIPQND QKRDKASFLL EVIEYIQFLQ EKLQMYEGSY QGWSQEPTKL IPWRNHGLAE 120 SFIDNSQVMK NGSSCENNVI IPSILANTQN SIESDLGNAA VFKALDHPPG SATSMVNMQT 180 QPNTFATHGR GSIPTQSFHE SASDSENVVY RPQFQSWQSR ECLTESAVPN NSANGQEDLT 240 VRDDSVGLSS AYSQGLQVWI CHRQASLCKL MLVNE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G38860.1 | 9e-49 | bHLH family protein |