PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021296318.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family bHLH
Protein Properties Length: 308aa    MW: 34549.8 Da    PI: 5.6831
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021296318.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH57.62.3e-184190255
                    HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                    r +h+e E+rRR++iN++f++Lr+l+P++    ++K +Ka+ L +++eYI+ Lq
  XP_021296318.1 41 RSKHSETEQRRRSKINERFQTLRDLIPQN----DQKRDKASFLLEVIEYIQFLQ 90
                    899*************************9....9*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MVKPVATAQL HQEEEDEDDY EDKGETVKEG KGSEQKANTN RSKHSETEQR RRSKINERFQ  60
TLRDLIPQND QKRDKASFLL EVIEYIQFLQ EKLQMYEGSY QGWSQEPTKL IPWRNHGLAE  120
SFIDNSQVMK NGSSFFKALD HPPGSATSMV NMQTQPNTFA THGRGSIPTQ SFHESASDSE  180
NVVYRPQFQS WQSRECLTES AVPNNSANGQ EDLTVRDDSV GLSSAYSQGI LNSLTQALQS  240
SGVDMSQASV SVQIDVGKRV ASGVTSMASS SKEKEIQYRS NQMIAQTGAH SYTEESDQAY  300
KRRRTGKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.13e-61bHLH family protein