PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021296317.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family bHLH
Protein Properties Length: 334aa    MW: 37184.7 Da    PI: 5.1399
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021296317.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH57.42.6e-184190255
                    HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                    r +h+e E+rRR++iN++f++Lr+l+P++    ++K +Ka+ L +++eYI+ Lq
  XP_021296317.1 41 RSKHSETEQRRRSKINERFQTLRDLIPQN----DQKRDKASFLLEVIEYIQFLQ 90
                    899*************************9....9*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MVKPVATAQL HQEEEDEDDY EDKGETVKEG KGSEQKANTN RSKHSETEQR RRSKINERFQ  60
TLRDLIPQND QKRDKASFLL EVIEYIQFLQ EKLQMYEGSY QGWSQEPTKL IPWRNHGLAE  120
SFIDNSQVMK NGSSCENNVI IPSILANTQN SIESDLGNAA VFKALDHPPG SATSMVNMQT  180
QPNTFATHGR GSIPTQSFHE SASDSENVVY RPQFQSWQSR ECLTESAVPN NSANGQEDLT  240
VRDDSVGLSS AYSQGILNSL TQALQSSGVD MSQASVSVQI DVGKRVASGV TSMASSSKEK  300
EIQYRSNQMI AQTGAHSYTE ESDQAYKRRR TGKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.15e-65bHLH family protein