PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021296159.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 305aa    MW: 33017.8 Da    PI: 5.8734
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021296159.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP222.72.5e-0755103255
             AP2   2 gykGVrwdkkrgrWvAeIrdpseng.kr..krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+Wv      ++++ k+     +  +f tae+Aa+a+++a+  l+g
  XP_021296159.1  55 RYRGVRQRS-WGKWV-----LRSGNsKTyeEVAW--NFATAEDAARAYDRAAIILYG 103
                     59****999.*****.....44444544565555..6***************98876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MDQEQDQSPL SHPPQETTAK TTTTTTPDQD TKSSESESSK QECKGKGGPD NNKFRYRGVR  60
QRSWGKWVLR SGNSKTYEEV AWNFATAEDA ARAYDRAAII LYGSKAQLNL NLGLFIVFFF  120
SSSSRGGSSS SSSTQTLRPL LPRPSGFAFS FVSSSNPVTH PASLIGGSSS RFXPYGLYPN  180
LLSPAALYPS MVQNPQALHI VQQTEPSLVV NHGDPTGTLT SYANPNPQQT QQHHQXSLHE  240
DINSLVGSVG SSLSLSAQTS VAPAVPDPGL TVGPGSPSVW PFTNDDEYPP ACIWDYGDPN  300
FLFDF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40220.15e-18ERF family protein