PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021296149.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

G2-like

Protein Properties

Length: 384aa MW: 42614 Da PI: 8.0165

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021296149.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102	3.7e-32	71	124	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH +Fv+ave+LGG+++AtPk +l+lm++kgL+++hvkSHLQ+YR+ XP_021296149.1 71 PRLRWTPDLHLCFVHAVERLGGQDRATPKLVLQLMNIKGLSIAHVKSHLQMYRS 124 8****************************************************7 PP
2	Myb_DNA-binding	51.3	2.7e-16	72	123	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++ +v+av++lGg t+k++ + m+ kg++ ++ks++q+y+ XP_021296149.1 72 RLRWTPDLHLCFVHAVERLGGQdraTPKLVLQLMNiKGLSIAHVKSHLQMYR 123 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 384 aa Download sequence
MMASDSFEDS ETSPDNNNNN KEGCSEDEEE EVNKSNSKAA NGESSSNSSV EENGKNYASG 60 SVRRYNRSKT PRLRWTPDLH LCFVHAVERL GGQDRATPKL VLQLMNIKGL SIAHVKSHLQ 120 MYRSKKIDDP NQAMTEQGLL FEGGDHPTYK LSHLPILRSL DNQRPSSSFR YGDVSWRGND 180 QKVYGSHRGG SALALDIATK GLYTSVTERL FGSYNNNSLG ISSPMAESCV RGKAASGRRT 240 HQLLEELQSL PGSWQTQTRP SRIGPITFTA QFQERVTDQT RCLSSINNSK QNSWKMTQES 300 QDRQKRKTAD SNHDLDLKLS LKMTPPNIND DDEFERDSLE GFASSLSLSL SSPSSSSKLS 360 SLKEGNADGR KHARTMASTL DLTL

Sequence ? help Back to Top

Protein Sequence Length: 384 aa Download sequence

MMASDSFEDS ETSPDNNNNN KEGCSEDEEE EVNKSNSKAA NGESSSNSSV EENGKNYASG  60
SVRRYNRSKT PRLRWTPDLH LCFVHAVERL GGQDRATPKL VLQLMNIKGL SIAHVKSHLQ  120
MYRSKKIDDP NQAMTEQGLL FEGGDHPTYK LSHLPILRSL DNQRPSSSFR YGDVSWRGND  180
QKVYGSHRGG SALALDIATK GLYTSVTERL FGSYNNNSLG ISSPMAESCV RGKAASGRRT  240
HQLLEELQSL PGSWQTQTRP SRIGPITFTA QFQERVTDQT RCLSSINNSK QNSWKMTQES  300
QDRQKRKTAD SNHDLDLKLS LKMTPPNIND DDEFERDSLE GFASSLSLSL SSPSSSSKLS  360
SLKEGNADGR KHARTMASTL DLTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40260.1	3e-52	G2-like family protein