PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021296139.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | ERF | ||||||||
Protein Properties | Length: 248aa MW: 28739.7 Da PI: 6.7582 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 37.2 | 7.5e-12 | 52 | 97 | 3 | 52 |
AP2 3 ykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkk 52 ++GVr+++ ++++eIrd + + kr +lg++ t+eeAa+a+ + + XP_021296139.1 52 FQGVRRRP-CSKFASEIRDpF-----NkKRLWLGTHSTEEEAAAAYQTKKCE 97 79******.7*********55.....34*****************9766655 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MKPGLNLPKK LRVIYNDPDA TDLSSDEEKI DCWKKRKNQI GSRRPRRSSS MFQGVRRRPC 60 SKFASEIRDP FNKKRLWLGT HSTEEEAAAA YQTKKCEFED MMAAKNKSSL TSELFSQLFP 120 SSVLDDVSSN PIQEEANNAE KTMTKHTMKK VVKEYRNVKE QPCLDQWDEW KDEPSIMELW 180 EVPPSASESW EELFRPYGHE NYLPCGSAAV SCLLLPKNSK DKLFDQPDIK TKMKDMAWAD 240 ELLNLEFC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49120.1 | 3e-18 | ERF family protein |