PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021296123.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | WOX | ||||||||
Protein Properties | Length: 198aa MW: 22432 Da PI: 8.9254 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 65.2 | 8.8e-21 | 35 | 96 | 1 | 57 |
TT--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++ R+++t+eq+++L +lF++ r+ps++++++++++l +++ ++V++WFqN++a+e++ XP_021296123.1 35 KCGRWNPTTEQVKVLTDLFRSgLRTPSTDQIQKISTQLsfygKIESKNVFYWFQNHKARERQ 96 568*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 114.6 | 5e-37 | 35 | 98 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++ RW+Pt+eQ+k+L++l++sGlrtP++++iq+i+++L+ yGkie+kNVfyWFQN+kaRerqk+ XP_021296123.1 35 KCGRWNPTTEQVKVLTDLFRSGLRTPSTDQIQKISTQLSFYGKIESKNVFYWFQNHKARERQKR 98 678***********************************************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 198 aa Download sequence |
MDDGLSGFSI KGGSVRGNGN NGSGGGGGGG GGGTKCGRWN PTTEQVKVLT DLFRSGLRTP 60 STDQIQKIST QLSFYGKIES KNVFYWFQNH KARERQKRRK VSMDENDFIC RDNKISSSKR 120 FFEVNHHQEQ VKGCQPERVI ETLQLFPLNS FEESDYQQEK HLRFHASDQC RETAAFPYKI 180 STPETDHHPP LDLRLSFL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G11260.1 | 3e-63 | WOX family protein |