PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021295942.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

NAC

Protein Properties

Length: 439aa MW: 48797.6 Da PI: 5.2605

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021295942.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	172.6	1.2e-53	30	157	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 l+pGfrFhPtdeelv++yLk+kv +k++++ ++i+evdiyk ePw+L +++k++++ewyfFs dkky +g r nrat++gyWkatgkd+ev XP_021295942.1 30 LAPGFRFHPTDEELVSYYLKRKVLNKPVRF-NAIAEVDIYKQEPWELSdkSRLKTRDQEWYFFSLLDKKYGNGARMNRATSQGYWKATGKDREVR 123 579**********************999.89**********85348899999*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + +++l+g+kktLvf++grap+g++t+Wvmheyrl XP_021295942.1 124 H-NSQLIGMKKTLVFHSGRAPDGVRTNWVMHEYRL 157 .99****************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 439 aa Download sequence
MGREKNSLAV VPGPTAAAAA AKTGGSATAL APGFRFHPTD EELVSYYLKR KVLNKPVRFN 60 AIAEVDIYKQ EPWELSDKSR LKTRDQEWYF FSLLDKKYGN GARMNRATSQ GYWKATGKDR 120 EVRHNSQLIG MKKTLVFHSG RAPDGVRTNW VMHEYRLVEE ESERIGALQG YVLCRVFHKN 180 NIGPPNGNRY APFIEAEWDD GSAALIPGVD AVDDVVAAND AVAGNDLAAA ENGVQRIDFE 240 QDIQYADEDT PPNDEVPRES LNERTDDCPL LPPCKIERSD DCPPLCVLNR EAPLPLLQYK 300 RRRHNDSGPN HANVSENSTR TTQDRCSSTT TTAATATTSP SSATTTAISA LLEFSLMESI 360 EPKENPHVPP PTYDTANLDS VVPPGCMKLI NELQNEIHKI SVERETLKLE MMSAQAMINI 420 LQSRIDSLSK ENEDLKRSN

Sequence ? help Back to Top

Protein Sequence Length: 439 aa Download sequence

MGREKNSLAV VPGPTAAAAA AKTGGSATAL APGFRFHPTD EELVSYYLKR KVLNKPVRFN  60
AIAEVDIYKQ EPWELSDKSR LKTRDQEWYF FSLLDKKYGN GARMNRATSQ GYWKATGKDR  120
EVRHNSQLIG MKKTLVFHSG RAPDGVRTNW VMHEYRLVEE ESERIGALQG YVLCRVFHKN  180
NIGPPNGNRY APFIEAEWDD GSAALIPGVD AVDDVVAAND AVAGNDLAAA ENGVQRIDFE  240
QDIQYADEDT PPNDEVPRES LNERTDDCPL LPPCKIERSD DCPPLCVLNR EAPLPLLQYK  300
RRRHNDSGPN HANVSENSTR TTQDRCSSTT TTAATATTSP SSATTTAISA LLEFSLMESI  360
EPKENPHVPP PTYDTANLDS VVPPGCMKLI NELQNEIHKI SVERETLKLE MMSAQAMINI  420
LQSRIDSLSK ENEDLKRSN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10480.2	1e-137	NAC family protein