PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021295905.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | NAC | ||||||||
Protein Properties | Length: 574aa MW: 64638.5 Da PI: 4.5475 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 167.6 | 4.2e-52 | 9 | 135 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 l+pGfrFhPtdeelv +yLk+kv +k+ +++i+ +diy++ePwdLp k k+k+++ ewyfFs dkky +g+r+nrat++gyWk+tgkd+++ XP_021295905.1 9 LAPGFRFHPTDEELVRYYLKRKVLNKP--SFDAISVIDIYRSEPWDLPdKsKLKSRDLEWYFFSALDKKYGNGSRTNRATERGYWKTTGKDRPIR 101 579***********************9..3478**************95347777888************************************* PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++vg+kktLv++kgrap+ge+t+Wvmheyrl XP_021295905.1 102 F-RERVVGMKKTLVYHKGRAPRGERTNWVMHEYRL 135 9.999****************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 574 aa Download sequence |
MSRDSATSLA PGFRFHPTDE ELVRYYLKRK VLNKPSFDAI SVIDIYRSEP WDLPDKSKLK 60 SRDLEWYFFS ALDKKYGNGS RTNRATERGY WKTTGKDRPI RFRERVVGMK KTLVYHKGRA 120 PRGERTNWVM HEYRLADEEL EKSGIQQDAF VLCRVFQKSG SGPKNGEQYG APFIEEEWEN 180 DDTIFVPGQH AVAVDEEVAN YDAFVEVNDF DENLDIGNPS ENAVLPQNFY HGESSNHVEY 240 SREFSEDYQK PPGNMPENAL LPSNFYYGES SNHAEHSREF TEDCQKPTVI HSTESDSKPH 300 HEYVFSDLPQ PNGIGTVAKP VKDEYVVEPI ENVNPADDNY LLDEPYLDVT DYLPANDGYF 360 LEANDLSNPI DPESDVFDLE EYLTFVDADD QPLAFDSDQM HSNGGTEQVS NASEHLEELG 420 NSDASSSKQE LVPTKFEPGT KYPFLKQASH MLGSFPAPPA FASEFPSKDA ALKLNSAAQA 480 SSSVHVVAGM IRITNMTSSS NQLDWSHGKN GNVNIVLSFS LPQGDVNSSN FLPMASLLSG 540 KTGSVLARGW FFLMFLWVLI ITVSLKFGTC IYTR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04410.1 | 1e-160 | NAC family protein |