PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021295880.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

TALE

Protein Properties

Length: 502aa MW: 56618.9 Da PI: 7.8022

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021295880.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	30	8.9e-10	319	356	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +e+ LA+++gL+ +qV++WF N R + XP_021295880.1 319 FEHflHPYPTDSEKLMLARQTGLSRTQVSNWFINARVR 356 665559******************************88 PP
2	BELL	82	7.7e-27	186	255	3	72
BELL 3 qelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +++ k ++L+ +l+eV+++Yk y++q+q v++sF++v glg+a+pY+ +A kai++hF cLk ai +qi XP_021295880.1 186 IQHRWKNSRLVLMLDEVYRKYKLYCQQVQSVVASFKCVSGLGNAAPYACFAFKAIAKHFSCLKSAILNQI 255 57889***************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 502 aa Download sequence
MEGSYNQPLH IPQQNRRNRL RVTIGTNQEE EQASQAPLLQ LNQPALICPS SSQPTFMHAF 60 PQSLCSSTMQ NPRDVNYQLF DGQGLSLSLS FQHQGNMNLP LNLDAQKSNE NSILGGFLQQ 120 NGQMRSSVPL GPFTGYASVL KSSRFSKPAQ QILDDFCGID YRVLDFPLET LGDGDVGKDQ 180 ITYDKIQHRW KNSRLVLMLD EVYRKYKLYC QQVQSVVASF KCVSGLGNAA PYACFAFKAI 240 AKHFSCLKSA ILNQIRFTDK TADNAVVGKD NNVLSVWTSD QGISNQNPVQ NVTFLQHPLW 300 RSQRGLPDHA VAVLKTWLFE HFLHPYPTDS EKLMLARQTG LSRTQVSNWF INARVRLWKP 360 MVEEIHMLEL RQAQNPSSEA TNQDAKLPSE LLLDKLPHFN SSQEVENIQT KRPRNNIFYP 420 DEQSKLQNSA LAFTNLPSNH HLGVGTSNFC LALSLNQNNN GLDLATQPLP MNLCHNFNFE 480 TDGELSLKAG FDVERQPHGK NF

Sequence ? help Back to Top

Protein Sequence Length: 502 aa Download sequence

MEGSYNQPLH IPQQNRRNRL RVTIGTNQEE EQASQAPLLQ LNQPALICPS SSQPTFMHAF  60
PQSLCSSTMQ NPRDVNYQLF DGQGLSLSLS FQHQGNMNLP LNLDAQKSNE NSILGGFLQQ  120
NGQMRSSVPL GPFTGYASVL KSSRFSKPAQ QILDDFCGID YRVLDFPLET LGDGDVGKDQ  180
ITYDKIQHRW KNSRLVLMLD EVYRKYKLYC QQVQSVVASF KCVSGLGNAA PYACFAFKAI  240
AKHFSCLKSA ILNQIRFTDK TADNAVVGKD NNVLSVWTSD QGISNQNPVQ NVTFLQHPLW  300
RSQRGLPDHA VAVLKTWLFE HFLHPYPTDS EKLMLARQTG LSRTQVSNWF INARVRLWKP  360
MVEEIHMLEL RQAQNPSSEA TNQDAKLPSE LLLDKLPHFN SSQEVENIQT KRPRNNIFYP  420
DEQSKLQNSA LAFTNLPSNH HLGVGTSNFC LALSLNQNNN GLDLATQPLP MNLCHNFNFE  480
TDGELSLKAG FDVERQPHGK NF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02030.1	1e-76	TALE family protein