PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021295852.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | GATA | ||||||||
Protein Properties | Length: 341aa MW: 37144.8 Da PI: 7.127 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 55.1 | 1e-17 | 250 | 283 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 C +C tkTp+WR gp g+ktLCnaCG++y++ + XP_021295852.1 250 CMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGR 283 99*****************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 341 aa Download sequence |
MIGPTNFIDE IDCGSFFDHI DDLLDFPNED VEAGLSASDS AVNAAAFPSI WTTHSESLPC 60 SDSVFSNNSA SDLSAELSVP YEDIVQLEWL SNFVDDSQCG ASLTIKKEES SSITKDSSQH 120 QFQTSSPVSV LESSSSCSGE KTLPRSPEMA APGRRGRARS KRPRPTTFNP RPAIQLISPT 180 SSVNENDIPQ PFVVPKAPSD SENYAESRLL IKIPRQVNPE HKKKKKIKLS LPAAPADNNQ 240 NSAGQAVRKC MHCEITKTPQ WRAGPMGPKT LCNACGVRYK SGRLFPEYRP AASPTFVPSL 300 HSNSHKKVLE MRNKVGVAPT TMVTSSPELI PNKSNPALDF M |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 161 | 165 | KRPRP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54810.2 | 8e-44 | GATA family protein |