PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021295689.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | ARR-B | ||||||||
Protein Properties | Length: 557aa MW: 61633.4 Da PI: 6.7005 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 79.9 | 2.9e-25 | 318 | 372 | 2 | 56 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ.kYRla 56 +++Wt+eLH++Fv+av+qL G ++A+P++ilelmkv+gLt+++v+SHLQ kYR++ XP_021295689.1 318 LKVDWTHELHKKFVQAVDQL-GVDQAIPSRILELMKVEGLTRHNVASHLQqKYRMH 372 5899****************.****************************549**86 PP | |||||||
2 | Myb_DNA-binding | 35.8 | 1.9e-11 | 320 | 367 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqk 46 WT e+++++v+av qlG + +++I + m +g+t+ ++ s++q+ XP_021295689.1 320 VDWTHELHKKFVQAVDQLGVDqaIPSRILELMKvEGLTRHNVASHLQQ 367 57********************************************96 PP | |||||||
3 | Response_reg | 25.1 | 8.7e-10 | 20 | 126 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+ d++ + + +++ le +y +v ++ + eal + + +++ ++ ++ ++ +G+ +k +++++ +lp ++ + +++ +++ +G XP_021295689.1 20 VLLLDEDSNSAAEIKSKLEAMDY-IVYTFCNQNEALSAVSSRPesFHVAIVEVSTSNNNGS--FKFLETAK-DLPTVMTSNIHCISTMMKCIALG 110 7899999999999**********.***************666666*************996..67777766.899999998888*********** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a +fl Kp ++++l++ XP_021295689.1 111 AVEFLRKPLSEDKLRN 126 *************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 557 aa Download sequence |
MVCTANDISA WKDFPKGLRV LLLDEDSNSA AEIKSKLEAM DYIVYTFCNQ NEALSAVSSR 60 PESFHVAIVE VSTSNNNGSF KFLETAKDLP TVMTSNIHCI STMMKCIALG AVEFLRKPLS 120 EDKLRNIWQH VVHKAFNAAG KDLSESLKPG KESVFSMLHL QMENGIPMNE DSDKTEDASV 180 VHEIDREPSP GSDKYPAPST PQLKQGERLL DDGDCQEHTN CSTEKESGEQ DGESKSVETT 240 SGNAIAEVTA PIGQPQGSRV SDVKGVADLV DGNKGESTVH SHPQNRVNRK DSQASAEKPS 300 TVSGLHSSCL NKANRKKLKV DWTHELHKKF VQAVDQLGVD QAIPSRILEL MKVEGLTRHN 360 VASHLQQKYR MHRRHILPKE DDPRWPQRDQ TQRSCYPHKP IMAFPPYHSN HVVPVGPLYP 420 MWGAPPHPAN IQMWGSPGYP PWQPTESWHW KPYPGFQADA WGCPVMHPPP GYCSAFTQNA 480 SGFHCSSTMD NRSGMPHNSV EHQPAEEVID KVVKEAINKP WLPLPLGLKP PSTEGVLAEL 540 SRQGISAVPP HINGSNP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18020.3 | 1e-151 | ARR-B family protein |