PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021295588.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

Dof

Protein Properties

Length: 339aa MW: 36125.3 Da PI: 9.4302

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021295588.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124	4.8e-39	69	129	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e+alkcprC+stntkfCy+nnysl+qPr+fCk+CrryWt+GGalrnvPvGgg+r+nk+s+ XP_021295588.1 69 PEAALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSK 129 67899*****************************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 339 aa Download sequence
MVFSSVPVYL DPHNWQQPPT QQPGVTSDNH HNPQLPPPPP PPQVGGGGAG AIRPGSMAER 60 ARLAKIPQPE AALKCPRCES TNTKFCYFNN YSLTQPRHFC KTCRRYWTRG GALRNVPVGG 120 GCRRNKRSKG SNRSKSPAVS ERQTGSSSSS STLASNSCTD MLGHMTPAPP QLPLLPPLHH 180 LGDYNSGDIG INFGGIQAQV AAATGGTGGT SANNMDFHIG TSSSGGGSML TNGLVEQWRS 240 LQQVQQFPFL SSLEPPAGLY PFESEGMEAP SYGGQLRSKP LESAITQLAA VKMEDTRHQG 300 LNLSRNFLGI SGSDQYWGGG GGNAWTDLSG SIKEKSTHR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55370.2	5e-51	Dof family protein