PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021295546.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MYB | ||||||||
Protein Properties | Length: 258aa MW: 29311.7 Da PI: 9.6154 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 28.4 | 3.8e-09 | 24 | 69 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46 +WT+eE + + a + +G + +W ++a++++ g+t +++ ++ XP_021295546.1 24 SWTKEENKMFESALAIYGEDvpdRWLKVAEMIP-GKTVSDVIKQYRE 69 7********************************.*******999986 PP | |||||||
2 | Myb_DNA-binding | 41 | 4.3e-13 | 99 | 143 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ +++ + ++G+g+W+ I+r + +t+ q+ s+ qky XP_021295546.1 99 PWTEEEHRRFLMGLLKYGKGDWRNISRNFVVSKTPTQVASHAQKY 143 8*****************************99************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence |
METLFATSFM SNSDWFDQES NSTSWTKEEN KMFESALAIY GEDVPDRWLK VAEMIPGKTV 60 SDVIKQYREL EEDVFKIEAG RFPIPGARGP DHERKKGVPW TEEEHRRFLM GLLKYGKGDW 120 RNISRNFVVS KTPTQVASHA QKYYQRQLSG GKDKRRPSIH DITTVNLTNT TFSDNHKPPS 180 VNHSNVLALQ QKLASMPKVG NNWNHPNDGS AMAFNSTHGN WFTSSQYQTA SNGLRLQGQN 240 LYGSAYHGAH IKPQSSVF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G11280.1 | 2e-88 | MYB family protein |