PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021295398.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | ERF | ||||||||
Protein Properties | Length: 226aa MW: 24406.6 Da PI: 10.22 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 67.5 | 2.5e-21 | 27 | 76 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr ++ +gr++AeIrdp gk+ r++lg+f+taeeAa+a++aa+++++g XP_021295398.1 27 HYRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAARAYDAAAREFRG 76 6********.**********8...557*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 226 aa Download sequence |
MAPKDKNASQ MLKKGNVNGI IKSKEVHYRG VRKRPWGRYA AEIRDPGKKS RVWLGTFDTA 60 EEAARAYDAA AREFRGPKAK TNFPVPDKTN SYIGNKRQNQ QSPSPSSTVE ESSSPTVERE 120 LKRVGSSATG IVGRFPFACH QQLALGGADR MGGVAHARPV LFFDALGRAE VVGQVYPVRF 180 EPVGVELSMG FGGVVQSESD SSSVVDCKPR LPGPGLDLNL PPPVDA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44210.1 | 8e-36 | ERF family protein |