PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021295387.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family bHLH
Protein Properties Length: 254aa    MW: 28879 Da    PI: 8.6183
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021295387.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.26.3e-1376128155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                     ++ +h  +Er+RR+++ + +  Lr+ lP       ++K s ++   +Av+YIk+Lq
  XP_021295387.1  76 KKITHRDIERQRRQEMATLYGALRSQLPFeY---LKGKRSISDHMHEAVNYIKHLQ 128
                     6789*************************77...9********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MDYVNSMIRS DQMADEFELF PIPCRHTIQQ DELFLIPSED ANDLSNWGDN RQRKRKAARA  60
FLVNDVDGKP IDNKKKKITH RDIERQRRQE MATLYGALRS QLPFEYLKGK RSISDHMHEA  120
VNYIKHLQKK ILKLSGRRDE LKRSSNSYAS SSVPESLQDS SEHSVKIRPC LAGVEVVMST  180
CLRQGLNLSS VLEVILAEGL SVVTCISTKV NERLMHTIVS EVNDGRNIEP SELQQKLTML  240
ATSSSELHLG MLAK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.12e-45bHLH family protein