PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021294820.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 241aa MW: 27631.4 Da PI: 9.9637 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 99.3 | 1.5e-31 | 24 | 73 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fss+g+lyey+ XP_021294820.1 24 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYA 73 79***********************************************8 PP | |||||||
2 | K-box | 115.1 | 6.8e-38 | 92 | 188 | 4 | 100 |
K-box 4 ssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 s++ s++ea+a+ +qqe+akL+ +i nLq+++Rh+lGe+L+ L +k+L++Le++Lek++++iRskKnell+++ie++qk+e +l+++n+ Lr+k+ XP_021294820.1 92 SNTGSVSEANAQFYQQEAAKLRVQIGNLQNSNRHMLGESLSALPMKDLRSLENRLEKGISRIRSKKNELLFAEIEYMQKREIDLHNNNQLLRAKI 186 444459****************************************************************************************9 PP K-box 99 ee 100 +e XP_021294820.1 187 AE 188 86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence |
MVYPNESGET SPQKKMGRGK IEIKRIENTT NRQVTFCKRR NGLLKKAYEL SVLCDAEVAL 60 IVFSSRGRLY EYANNSVKAT IERYKKTCAD SSNTGSVSEA NAQFYQQEAA KLRVQIGNLQ 120 NSNRHMLGES LSALPMKDLR SLENRLEKGI SRIRSKKNEL LFAEIEYMQK REIDLHNNNQ 180 LLRAKIAENE RKQQNINLMP GGSNFEIMPS QPFDSRNYFQ VNALQPASHY PHQDQMALQL 240 V |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18960.1 | 1e-130 | MIKC_MADS family protein |