PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021294731.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family NAC
Protein Properties Length: 292aa    MW: 33527.8 Da    PI: 8.5457
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021294731.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM159.81.1e-49191491128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                     l pGfrFhPtdeelv +yLk+kve+k +++ + ik+vdiyk++PwdLp +k+++ +ekewyfF++r +ky+++ r+nr+t sg+Wkatg dk+++
  XP_021294731.1  19 LLPGFRFHPTDEELVGFYLKRKVEKKLFSI-DLIKHVDIYKYDPWDLPiSKLSTvTEKEWYFFCRRGRKYRNSIRPNRVTGSGFWKATGIDKPIY 112
                     579***************************.99***************7544443788************************************* PP

             NAM  94 sk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     s    +  +glkk+Lv+y+g+a kg+ktdW+mhe+rl
  XP_021294731.1 113 SVgeFHDCIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 149
                     *8443455***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MEVEKTISSG NNGDDEDVLL PGFRFHPTDE ELVGFYLKRK VEKKLFSIDL IKHVDIYKYD  60
PWDLPISKLS TVTEKEWYFF CRRGRKYRNS IRPNRVTGSG FWKATGIDKP IYSVGEFHDC  120
IGLKKSLVYY RGSAGKGTKT DWMMHEFRLP AGQNPSLSNT KKDNLPEAEV WTLCRIFKRD  180
VSYRKFASDW QNKKNLSKQN TTASGSRTCS IESDNSVEVK SFGVLDEKEI ERKLANDHLL  240
GRNQFFAGTT QVPSYLSFSN PNGGEFFGQQ NWDELTPVVD YTLGTSLLYS DL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.12e-93NAC family protein