PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021294730.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family NAC
Protein Properties Length: 293aa    MW: 33641.9 Da    PI: 8.7788
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021294730.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM159.71.1e-49191501128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                     l pGfrFhPtdeelv +yLk+kve+k +++ + ik+vdiyk++PwdLpk  k+++ +ekewyfF++r +ky+++ r+nr+t sg+Wkatg dk++
  XP_021294730.1  19 LLPGFRFHPTDEELVGFYLKRKVEKKLFSI-DLIKHVDIYKYDPWDLPKvsKLSTvTEKEWYFFCRRGRKYRNSIRPNRVTGSGFWKATGIDKPI 112
                     579***************************.99***************54533324788************************************ PP

             NAM  93 lsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +s    +  +glkk+Lv+y+g+a kg+ktdW+mhe+rl
  XP_021294730.1 113 YSVgeFHDCIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 150
                     **8443455***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MEVEKTISSG NNGDDEDVLL PGFRFHPTDE ELVGFYLKRK VEKKLFSIDL IKHVDIYKYD  60
PWDLPKVSKL STVTEKEWYF FCRRGRKYRN SIRPNRVTGS GFWKATGIDK PIYSVGEFHD  120
CIGLKKSLVY YRGSAGKGTK TDWMMHEFRL PAGQNPSLSN TKKDNLPEAE VWTLCRIFKR  180
DVSYRKFASD WQNKKNLSKQ NTTASGSRTC SIESDNSVEV KSFGVLDEKE IERKLANDHL  240
LGRNQFFAGT TQVPSYLSFS NPNGGEFFGQ QNWDELTPVV DYTLGTSLLY SDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.11e-93NAC family protein