PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021294488.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | Trihelix | ||||||||
Protein Properties | Length: 349aa MW: 39024.1 Da PI: 9.0561 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 54.1 | 4.2e-17 | 23 | 101 | 2 | 72 |
trihelix 2 WtkqevlaLiearremeerlrrgk........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrt 72 Wt +e+++Liea++ ++er +++ + +W++v ++++++g+ rs++qC++kw+nl ++ykk++e +++ + XP_021294488.1 23 WTVNETMVLIEAKKMDDERRMKKSgdsegrskPTELRWKWVEDYCWRKGCMRSQNQCNDKWDNLMRDYKKVREYQRRTA 101 *************97777666532223333338899*************************************999853 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 349 aa Download sequence |
MHLVMADQGG NNIVMREYRK GNWTVNETMV LIEAKKMDDE RRMKKSGDSE GRSKPTELRW 60 KWVEDYCWRK GCMRSQNQCN DKWDNLMRDY KKVREYQRRT AEAGEGNNNN NEGSYWEMEK 120 NARKEKNLPS NMLRQIYEHL EEVVEKKGVQ RVVAAGGSGP NPNIPYVMDR PMTSVQPLLP 180 PLLQHQLPAA IPPAIALPLP ALPPLPPPTA APAPLVQPSP LPYAQPLPTM CDSSDSDTSE 240 YSDSPAKRRR RSGGNGEGTS GTASANNSNE VGTAISKSAS IIAEAIQASE EREERRHRDL 300 VSLHERRLKI EESRTEINRN GIDGLVVAIN KLANSILALA SHKNQSAPK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G35640.1 | 4e-60 | Trihelix family protein |