PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021294426.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family GATA
Protein Properties Length: 319aa    MW: 34775.1 Da    PI: 6.5952
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021294426.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA53.24.1e-17213247135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C +C + kTp+WR gp g+ktLCnaCG++y++ +l
  XP_021294426.1 213 CLHCAAEKTPQWRTGPMGPKTLCNACGVRYKSGRL 247
                     99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MEAADFFVGG YYGGAAGGDY SSEKRMSAEQ KLAENFTVDD LLDFSNEDAV ISDGFFDNVA  60
GNSTDSSTVT CNSSASGGDN HFSSANFPHS SQFSGELCVP YDDLAELEWL SNFVEDSFST  120
DQNLQSNLQI FATSKSPTPE SSSSSTRIDS LTRSPTNPIF QNDTPLPGKA RSKRSRAAPC  180
DWSTRLLHLT PKSTGQKKRD NPNANSESSG RKCLHCAAEK TPQWRTGPMG PKTLCNACGV  240
RYKSGRLVPE YRPASSPTFV STKHSNSHRK VVELRRQKDL QRAQQQQFLS QTSIFGISNG  300
GGSDDFLIHH GGPDFSHMI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.14e-70GATA family protein