PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_021294404.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 250aa MW: 27559.2 Da PI: 5.2235 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 29.9 | 1e-09 | 94 | 140 | 5 | 54 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + rE+ RRdr+N++f eL ++l + + K++Ka iL Av+ + +L XP_021294404.1 94 KACREKMRRDRLNDRFLELGSILDPG---RPLKVDKAVILVDAVRMVTQL 140 678**********************8...88**************99988 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 250 aa Download sequence |
MMSRQPNGEE LVSSENPNTW IFDDYGLLED IPVPGGDLPS LDPAAPIWSS QSLACSTPPL 60 SVEFNESFGN SDSLNETGSR KRARSGSCSA SGSKACREKM RRDRLNDRFL ELGSILDPGR 120 PLKVDKAVIL VDAVRMVTQL RDEAQKLRES NESLQEKINE LKAEKNELRD EKQRLKTEKE 180 NLERQVKALG TQPGFLPHPP AIPTPFSTPG QVVGGKLVPF VGYPGVSMWQ FLPPASVDTS 240 QDHILRPPVA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G54680.1 | 5e-81 | bHLH family protein |