PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021294377.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | ERF | ||||||||
Protein Properties | Length: 239aa MW: 26132.7 Da PI: 4.6538 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.5 | 5.9e-17 | 59 | 109 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr ++ +g+Wv+eIr+p++ + r++lg+f +e+Aa+a + a+++++g XP_021294377.1 59 PVYRGVRMRS-WGKWVSEIREPRK---KSRIWLGTFPNPEMAARAQDVAALSIKG 109 68*****998.**********843...6**********************99876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence |
MTETNHSSSE VESCSSNNSN SSASSSSQTR QNLSRKTNPA QSPEDSRAKK PRDSSSKHPV 60 YRGVRMRSWG KWVSEIREPR KKSRIWLGTF PNPEMAARAQ DVAALSIKGD SAILNFPELA 120 ELLPRPVSLL PRDIQAAAAK AAAMVNFDTP SSSSSSSSES SSLSESNASE EPAELSEIVQ 180 LPNIEGNFDS LFDSRNEFIL LDSVDGWAYP PQDFYGGFCD QTWATENLVP GSFGTSMWE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G25810.1 | 2e-52 | ERF family protein |