PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021294199.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family bHLH
Protein Properties Length: 320aa    MW: 35697.8 Da    PI: 8.3129
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021294199.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.81.1e-0981108330
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC CS
             HLH   3 rahnerErrRRdriNsafeeLrellPka 30 
                     ++h+e+ErrRR+riN  +++Lr+llP +
  XP_021294199.1  81 KSHSEAERRRRERINAHLDTLRSLLPCR 108
                     58************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MFRMAAYSFN NNFSSGNCYS GLFNPLSRDM GPRNGSSRGG SLSVSVSQTL VLDSEKGELV  60
KAPVKVGKKS VSEEKVIAAL KSHSEAERRR RERINAHLDT LRSLLPCREK RALMANLAFS  120
HAIVLIICCP LLEKKENEAK FTERKEEDSL YIWICSILTK LEMDKATLLG EVIRQVKELK  180
KNATEASKGF LVPMDDDEVN VEPCEEEANG TFLFKASICC DYRPELLTDL RQALDALPIK  240
MVKAETSTLG SRLKNDFVFA GYRTAHADDA EARRFLACSI HQALNSVLEK ASASPEYSPS  300
SIFPNKRRRM SYFDSSSSSS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18792ERRRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.11e-24bHLH family protein