PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021293950.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family WRKY
Protein Properties Length: 304aa    MW: 33875.4 Da    PI: 7.3725
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021293950.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY108.92.5e-34163220259
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dgy+WrKYGqK vk+s++prsYYrCt+++C+vkk+vers +dp+vv++tYeg+Hnh+
  XP_021293950.1 163 EDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCTVKKRVERSFQDPSVVITTYEGQHNHP 220
                     8********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
MSDHEFRDFY YQAAFHNDQQ GVGETGMYRV SSSLQDPSYM SFTDCLHSSM DYCSLEKAFG  60
LSPSSSEVFS SVEGNQTKQA GAGDLGGNTS EVMTTPNSSI SSSSSEAGCE EDSDKSKKDR  120
QPKGSEDGGE SSKKGNKAKK KGEKKQREPR FAFMTKSEVD HLEDGYRWRK YGQKAVKNSP  180
YPRSYYRCTT QKCTVKKRVE RSFQDPSVVI TTYEGQHNHP LPTTLRGSAA GLFPPSMLTP  240
SPLAGPSFPH ELFLQMPHHM NNQAGSAGSM FAENFSPFQQ YHHQVPDYGL LQDIVPSRFL  300
KHEP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18170.11e-63WRKY family protein