PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021293850.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 396aa    MW: 44315 Da    PI: 4.5346
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021293850.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.83e-19124173255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+G+r+++ +g+W+AeIrdp++     r++lg+f taeeAa+a++a +++++g
  XP_021293850.1 124 QYRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDAEARRIRG 173
                     69*******.**********954...4************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 396 aa     Download sequence    
MCGGAIISDF IPPTRTRRLT ADYLWPDLKN SGSKKRSGKR YSKPVIDLDD DFEADFQEFK  60
DEETDVDDFD DVDDVLADVK PFAFSATKKL ASAASRVIEG SNFVKSAEFS GQAEKSAKRK  120
RKNQYRGIRQ RPWGKWAAEI RDPRKGVRVW LGTFNTAEEA ARAYDAEARR IRGKKAKVNF  180
PDEAARTSPK RAVKANSQKS LSRSNLSPVQ PNLNQNFNYL SKPEQDYFDT MGFVEEKPSM  240
DQFAYVDPLP VSEDVGLKPF AQSDNAPLYF NSDQGSNSFD CSDFGWGEQG AKTPEISSIL  300
EASIESDEFV EDANPKKKLK PSSDNVTPTE DNSAKSLSDE LLALDNQMKY FQMPFIEGNW  360
DASIDAFLNG DATQDGGNPM DLWSFDDFPS MAEGVF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53910.15e-90ERF family protein