PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021293767.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MYB | ||||||||
Protein Properties | Length: 298aa MW: 33977.1 Da PI: 7.3416 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.2 | 7e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+ Ed +l+d++k +G g+W+ +++ g++R++k+c++rw++yl XP_021293767.1 14 RGAWTAMEDRILKDYIKIHGEGQWRNLPKRAGLKRCGKSCRLRWLNYL 61 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 52.7 | 9.5e-17 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ +++E+el+++++k+lG++ W++Ia +++ gRt++++k++w++ XP_021293767.1 67 RGNISPDEEELIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNT 110 7899******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 298 aa Download sequence |
MGRSPCCSKE GLNRGAWTAM EDRILKDYIK IHGEGQWRNL PKRAGLKRCG KSCRLRWLNY 60 LRPDIKRGNI SPDEEELIIR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNT NIGKKLQDKQ 120 SHSLSNRRPS NRSQKKANPT IETPVRQPSK ANLTSCVIRT KATRCTKVFI NIPEPQLEDT 180 YKPSVLRPFP LPGEPESSEF VAKEDNDPSN FMIDLEVDEN FLSEFLNSEF SQPQPSHFQN 240 KGDSYSNSDA CDPGQNSSTN SDQSLFLSND MMQDADFTSI ASLMESELDW LQDQADPN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G35550.1 | 1e-66 | MYB family protein |