PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021293640.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

G2-like

Protein Properties

Length: 337aa MW: 36619.2 Da PI: 8.2737

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021293640.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107.8	6e-34	49	103	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rlrWt+eLHerFv+av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl XP_021293640.1 49 KQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRL 103 79****************************************************8 PP
2	Myb_DNA-binding	63.4	4.4e-20	51	102	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+k + r mg +g+t +++ks++qky+ XP_021293640.1 51 RLRWTHELHERFVDAVAQLGGPdraTPKGVLRVMGvQGLTIYHVKSHLQKYR 102 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 337 aa Download sequence
MYQPKTVPGS SLVRNNSIVH GQHLDCGASQ MDPISGGNSL TNNPNLASKQ RLRWTHELHE 60 RFVDAVAQLG GPDRATPKGV LRVMGVQGLT IYHVKSHLQK YRLAKYLPDS SSDGKKADKK 120 ETGDMLSNLD GSSGMQITEA LKLQMEVQKR LHEQLEVQRQ LQLRIEAQGK YLKKIIEEQQ 180 RLSGVLAEAP GSGASVPAFG DNGLESDKKT DPATPAPTSE SPLQDKAAKE RAPAKSHSID 240 ESFSSHHEPL TPDSGCHVGS PAGSPKGERL MKKQRVSMAA AFAKPDVVLP HQILESSISS 300 SFQQSHSVFM TREQFDPSSG MSKGNEDQLE KASGTEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	1e-112	G2-like family protein