PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_021293568.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 173aa MW: 19278.1 Da PI: 8.6382 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 29.9 | 1e-09 | 16 | 61 | 5 | 54 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +E+ RR r+++ +++L +llP++ +K+s ++Le+A+ +I++L XP_021293568.1 16 RTLVEKERRMRLRNLYSQLSSLLPPQ----PRKMSTHDVLEQATLCINQL 61 6789*********************6....39****************99 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 173 aa Download sequence |
MDTGAASGSS SSKINRTLVE KERRMRLRNL YSQLSSLLPP QPRKMSTHDV LEQATLCINQ 60 LRKRVEELKQ MKLQLEECKG ATETTSGPSI YPVINISDLD STLEVNLITG WDGKFKLSDI 120 IKVLMEEGAE VKTAVANHNA GDRTIYSICC RAINSRIGIA TSRVQERLQD LIS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G10586.1 | 5e-23 | bHLH family protein |