PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021293512.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family NAC
Protein Properties Length: 256aa    MW: 29201.9 Da    PI: 9.5141
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021293512.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM166.49.7e-52141381128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrFhPtdeelvv+yL++kv + +l++ ++i+evd++k++Pw+Lp      e+e yfFs+r+ ky++g+r+nrat sgyWkatg dk+++++
  XP_021293512.1  14 LPPGFRFHPTDEELVVQYLRRKVLAWPLPA-SIIPEVDVCKADPWELPGD---LEQERYFFSTREAKYPNGNRSNRATVSGYWKATGIDKQIVTS 104
                     79****************************.89***************54...46799*********************************9998 PP

             NAM  96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      ++++vg+kktLvfy+g+ p+g++tdW+mheyrl
  XP_021293512.1 105 rSNQVVGMKKTLVFYRGKPPHGSRTDWIMHEYRL 138
                     57778***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MEKLNFVKNG VLRLPPGFRF HPTDEELVVQ YLRRKVLAWP LPASIIPEVD VCKADPWELP  60
GDLEQERYFF STREAKYPNG NRSNRATVSG YWKATGIDKQ IVTSRSNQVV GMKKTLVFYR  120
GKPPHGSRTD WIMHEYRLVS AETAACNAPQ KKNQTQSHVV PMENWVLCRI FLKKRSGTTK  180
NDDDSMQSCN ENGARKVRTS RPVFYDFLTK DRTDLNLAPS SSSSGSSGIT EVSNNDTDDH  240
EESSSCNSFP YFRRKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.11e-104NAC family protein