PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021293487.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

G2-like

Protein Properties

Length: 374aa MW: 41852.4 Da PI: 9.3776

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021293487.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102	3.7e-32	196	249	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ XP_021293487.1 196 PRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 249 9****************************************************7 PP
2	Myb_DNA-binding	48.6	1.9e-15	197	248	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ XP_021293487.1 197 RMRWTTTLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 248 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 374 aa Download sequence
MELFPAQPDX SLQISPPNSK PSSTWRRTEE DMDLGFWKRA LDSRNXVSSM AKPDNCFELS 60 LSNPRVPESN SNTIHLLQTV ANCNGNLFHL SPKQFPHHHN QLQHPVLYQP QQQQQGLGQE 120 LGFLRPIRGI PVYQNPPPPT PFPFAQQPLD SSLASSPSSL VTNNTSNTSL SPFQSQGLMR 180 SRFMSRFPAK RSMRAPRMRW TTTLHARFVH AVELLGGHER ATPKSVLELM DVKDLTLAHV 240 KSHLQMYRTV KTTDRAAASS GQSDAFENGS SGDTSEDLMF DIQNPRRSEI SVQQGRPSSN 300 AHQDKEYHGL WSNSSREAWL HGKPKDSAGN LPSLEKDMDP KFLSYERISD VSSSTLSGTS 360 PKKPNLEFTL GVPH

Sequence ? help Back to Top

Protein Sequence Length: 374 aa Download sequence

MELFPAQPDX SLQISPPNSK PSSTWRRTEE DMDLGFWKRA LDSRNXVSSM AKPDNCFELS  60
LSNPRVPESN SNTIHLLQTV ANCNGNLFHL SPKQFPHHHN QLQHPVLYQP QQQQQGLGQE  120
LGFLRPIRGI PVYQNPPPPT PFPFAQQPLD SSLASSPSSL VTNNTSNTSL SPFQSQGLMR  180
SRFMSRFPAK RSMRAPRMRW TTTLHARFVH AVELLGGHER ATPKSVLELM DVKDLTLAHV  240
KSHLQMYRTV KTTDRAAASS GQSDAFENGS SGDTSEDLMF DIQNPRRSEI SVQQGRPSSN  300
AHQDKEYHGL WSNSSREAWL HGKPKDSAGN LPSLEKDMDP KFLSYERISD VSSSTLSGTS  360
PKKPNLEFTL GVPH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32240.1	2e-75	G2-like family protein