PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021293485.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | bHLH | ||||||||
Protein Properties | Length: 165aa MW: 18623.6 Da PI: 10.5572 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 30.7 | 5.8e-10 | 10 | 59 | 2 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 r++ n +Er RR++++ f++L llP+ + K+s + Le+A+ Y+++Lq XP_021293485.1 10 RMNRNLIERERRSQMKVLFSNLVALLPPhP-----SKMSIHALLERATIYVNQLQ 59 8999************************55.....8******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 165 aa Download sequence |
MPRGTASLTR MNRNLIERER RSQMKVLFSN LVALLPPHPS KMSIHALLER ATIYVNQLQK 60 RTEELKQKKA QLEEGQSTAT RISPVIKITD FDSTIQVNLV AGTDMKFALC DIISILEEEG 120 AEVLSATYHI VGNKVVLSLH SQAAYSRIGI QNSRVRDRLK RLQIS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G10586.1 | 1e-22 | bHLH family protein |