PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021293442.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 260aa MW: 29659.6 Da PI: 4.2465 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 59.1 | 7.3e-19 | 26 | 80 | 3 | 57 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 k++++t++q++ Le+ Fe ++++ e++ ++Ak+lgL+ rqV +WFqNrRa+ k+ XP_021293442.1 26 KKRRLTATQVQFLESSFEVENKLEPERKVQIAKELGLQPRQVAIWFQNRRARFKN 80 56689***********************************************995 PP | |||||||
2 | HD-ZIP_I/II | 127.6 | 5.2e-41 | 26 | 115 | 2 | 91 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 kkrrl++ qv++LE+sFe e+kLeperKv++a+eLglqprqva+WFqnrRAR+k+kqlEkdy++Lk++yd+lk++ ++L ke+e+L++e+ XP_021293442.1 26 KKRRLTATQVQFLESSFEVENKLEPERKVQIAKELGLQPRQVAIWFQNRRARFKNKQLEKDYDSLKASYDELKTDYDNLLKEKEDLENEV 115 9*************************************************************************************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence |
MLSFQPLDKE ESGDDDFDGS YHPPGKKRRL TATQVQFLES SFEVENKLEP ERKVQIAKEL 60 GLQPRQVAIW FQNRRARFKN KQLEKDYDSL KASYDELKTD YDNLLKEKED LENEVLALKE 120 KLLIREEGME TLESLDAINS SNAESKKPNC DTSPENVSHV PLVACKQEEA CSAKSDVFDS 180 DSPRYTDGNH SSLIEPADSS NVFEPDQSDF SQDEEDNLSK SLLHPPFFPK FEVDCYYDAP 240 ASSCNFALPG EDQSFWSSLY |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 74 | 82 | RRARFKNKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01470.1 | 5e-38 | HD-ZIP family protein |