PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021293396.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family TALE
Protein Properties Length: 314aa    MW: 35478.9 Da    PI: 4.5183
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021293396.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox291.8e-092572912155
                     HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS
        Homeobox  21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 
                     k +yp+++++  LA+++gL+++q+ +WF N+R ++
  XP_021293396.1 257 KWPYPTEADKIALAESTGLDQKQINNWFINQRKRH 291
                     569*****************************885 PP
2ELK24.47e-09211232122
             ELK   1 ELKhqLlrKYsgyLgsLkqEFs 22 
                     +LK+ Llr +++++++Lk EFs
  XP_021293396.1 211 DLKDTLLRRFGSHISTLKLEFS 232
                     69*******************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MEEMYGFHST GEYADKALMS PENLILPSEY QAWLCSSGRI PMFGSDELIS AASAVSEAAS  60
ITPEIQREED MSSVIKAKIA SHPSYPRLLE AYIDCQKVGA PPEVASILDE ILRENDVNKR  120
DIVPTCLGAD PELDEFMETY CDMLVKYKSD LSRPFDEATV FLNKIEMQLR NLCTGASIQG  180
ASDEGAASSD EDLSGGEVDA QEAQPRSEDR DLKDTLLRRF GSHISTLKLE FSKKKKKGKL  240
PREARQTLLD WWNVHYKWPY PTEADKIALA ESTGLDQKQI NNWFINQRKR HWKPSESMQF  300
AVMDNLSGQF FTED
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G23380.11e-152TALE family protein